Nicotinamide Mononucleotide Adenylyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-157   ASP-158  1.8 2.0 10.8 -27.3 74.8 79.5 -84.5
 ASP-158   LEU-159  5.5 5.8 -14.3 -1.8 170.4 164.2 -111.6
 LEU-159   LEU-160  5.2 6.6 13.7 -8.2 69.2 54.1 22.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-177   VAL-178  3.8 3.8 -1.2 -2.1 101.6 104.0 -62.9
 VAL-178   ALA-179  0.9 1.2 14.9 -7.0 134.4 138.6 52.8
 ALA-179   ASN-180  2.2 2.4 -8.2 -5.9 65.9 68.1 58.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees