Phosphoenolpyruvate Carboxykinase [Atp]

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-1238   ILE-1239  1.3 2.0 -3.1 5.9 61.1 60.6 3.1
 ILE-1239   PHE-1240  1.2 0.8 -7.5 7.7 48.6 52.5 1.5
 PHE-1240   PHE-1241  3.8 3.0 20.2 -33.6 138.4 142.5 63.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-1246   GLY-1247  13.0 12.1 -11.9 -57.0 34.7 15.7 356.4
 GLY-1247   LYS-1248  12.2 12.6 37.2 -6.3 128.1 115.7 -122.7
 LYS-1248   THR-1249  9.6 9.3 8.5 -0.2 158.9 163.1 -46.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-1348   LYS-1349  5.3 6.5 8.6 1.0 99.4 99.1 -14.1
 LYS-1349   ARG-1350  7.1 7.9 -16.7 7.1 53.8 47.0 49.0
 ARG-1350   VAL-1351  5.5 6.2 2.9 4.5 125.7 123.8 -21.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-1399   SER-1400  7.5 7.3 41.7 -39.9 112.3 106.5 36.6
 SER-1400   SER-1401  7.9 7.2 -10.4 9.6 68.8 68.8 -8.2
 SER-1401   CYS-1402  5.5 4.9 -1.2 -0.9 13.8 22.1 16.3
 CYS-1402   PHE-1403  4.4 4.5 -0.1 1.6 53.2 53.3 -13.2
 PHE-1403   GLY-1404  6.3 6.1 -4.1 -5.3 71.4 80.8 7.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-1428   LYS-1429  9.0 10.0 5.1 -24.5 136.7 133.7 83.1
 LYS-1429   ALA-1430  9.2 9.7 -10.9 10.5 72.2 72.7 -4.4
 ALA-1430   TYR-1431  6.9 7.3 -8.3 7.6 81.4 81.5 15.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees