Ruvb

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-78   ASP-79  9.1 7.8 80.1 -29.1 83.8 88.2 0.8
 ASP-79   LEU-80  9.9 9.3 7.6 -5.5 99.5 102.2 -16.7
 LEU-80   ALA-81  6.6 6.7 5.9 9.3 167.2 168.4 -48.1
 ALA-81   ALA-82  5.8 5.6 8.3 -13.7 119.8 117.5 -0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-102   SER-103  3.6 2.8 -6.7 20.7 91.9 89.9 -19.7
 SER-103   ARG-104  5.0 4.9 9.8 -1.0 103.3 94.5 -11.6
 ARG-104   GLN-105  5.0 5.8 6.0 -29.7 168.2 153.3 74.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-109   LEU-110  1.8 2.8 73.3 -61.6 84.2 88.1 22.6
 LEU-110   TYR-111  2.2 2.4 18.8 -24.0 79.0 73.5 5.8
 TYR-111   PRO-112  5.1 5.9 36.8 -8.5 15.0 10.2 85.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-116   PHE-117  8.8 9.9 -86.0 130.3 58.5 90.7 -22.0
 PHE-117   VAL-118  6.3 6.8 -24.9 64.0 55.1 75.5 -40.7
 VAL-118   MET-119  3.5 3.8 60.4 -45.3 42.7 40.6 52.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-134   GLU-135  1.8 1.4 114.0 -94.5 94.3 61.6 11.8
 GLU-135   LEU-136  2.0 2.8 -75.7 39.1 72.9 59.6 49.3
 LEU-136   PRO-137  4.9 5.2 -11.8 3.3 106.8 107.2 10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees