Uracil-Dna Glycosylase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-77
SER-78
7.8
7.7
-35.5
25.9
138.7
142.3
-100.8
SER-78
VAL-79
5.7
5.6
-24.8
20.0
129.1
126.5
-24.5
VAL-79
ARG-80
7.2
7.4
11.0
0.4
71.9
67.6
51.6
ARG-80
PRO-81
7.9
8.0
-10.9
12.7
144.6
137.0
98.0
PRO-81
GLY-82
6.2
6.1
52.2
-76.6
34.4
27.7
-232.6
PRO-81
GLY-82
6.2
6.1
52.2
-76.6
34.4
27.7
-232.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-81
GLY-82
6.2
6.1
52.2
-76.6
34.4
27.7
-232.6
PRO-81
GLY-82
6.2
6.1
52.2
-76.6
34.4
27.7
-232.6
GLY-82
ILE-83
7.8
6.5
-23.8
40.9
85.3
88.9
-15.7
ILE-83
ALA-84
7.9
8.4
-5.2
31.2
93.9
90.7
63.7
ALA-84
ILE-85
7.5
8.5
14.8
-20.0
145.7
155.9
6.2
ILE-85
PRO-86
7.2
7.6
-1.8
32.8
90.1
74.1
-80.0
PRO-86
PRO-87
10.8
10.8
1.5
-33.8
121.7
102.7
140.0
PRO-87
SER-88
13.2
13.3
12.9
-19.0
145.9
143.7
25.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-115
ARG-116
3.6
4.3
6.4
-28.1
66.7
63.6
-14.6
ARG-116
GLN-117
7.0
7.7
18.6
4.4
54.0
66.3
116.7
GLN-117
GLY-118
6.4
7.3
-49.2
42.0
136.3
148.9
-76.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-152
ASN-153
3.6
3.2
12.3
-20.3
132.1
129.9
99.6
ASN-153
GLN-154
3.2
3.0
41.3
-47.0
143.0
153.9
-6.5
GLN-154
HIS-155
3.2
2.8
-20.5
16.3
93.7
88.5
-0.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees