Phosophoribosylglycinamide Formyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-13   LEU-14  9.8 10.0 -35.4 7.9 71.7 71.6 41.8
 LEU-14   GLN-15  7.8 8.0 -6.6 7.6 32.1 29.1 1.2
 GLN-15   ALA-16  7.3 7.8 -8.7 -2.2 98.1 93.8 42.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-18   ASP-19  2.5 3.1 3.4 -5.4 54.4 54.9 -46.5
 ASP-19   SER-20  3.4 3.8 0.1 -4.7 113.6 113.6 51.5
 SER-20   THR-21  4.4 4.6 8.3 0.2 90.9 92.4 47.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-23   PRO-24  6.7 6.0 2.7 -37.1 83.8 81.5 13.3
 PRO-24   ASN-25  9.9 9.1 -152.7 178.7 151.2 148.5 249.1
 ASN-25   SER-26  11.3 10.9 -33.8 -6.0 136.6 136.1 -277.4
 SER-26   SER-27  8.0 7.5 -2.6 -2.7 127.3 119.7 42.5
 SER-27   ALA-28  8.5 8.3 19.0 -21.7 77.5 70.9 44.9
 ALA-28   GLN-29  5.4 5.6 7.3 -4.6 145.0 139.9 -22.8
 GLN-29   ILE-30  5.3 5.0 11.7 -4.5 66.2 65.7 -2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-103   MET-104  3.1 3.2 2.2 3.9 119.7 116.3 -29.3
 MET-104   LEU-105  2.8 2.9 -6.8 4.6 89.3 88.4 49.9
 LEU-105   ASN-106  3.6 3.7 2.3 5.0 103.4 103.5 26.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-137   PHE-138  7.1 7.3 0.8 -4.2 94.6 97.8 -11.5
 PHE-138   VAL-139  3.7 3.9 -5.0 2.8 60.8 58.0 2.0
 VAL-139   ALA-140  5.1 5.4 -1.4 3.5 22.8 27.3 -62.3
 ALA-140   GLU-141  5.5 5.1 -18.9 -21.8 72.0 59.7 184.5
 ALA-145   GLY-146  9.6 8.1 -141.7 -168.6 116.0 149.8 431.6
 GLY-146   GLN-147  6.3 7.2 -35.2 -2.8 105.0 102.6 -133.0
 GLN-147   ILE-148  6.9 7.1 -12.1 3.7 157.9 159.0 -111.5
 ILE-148   ILE-149  9.4 9.7 1.4 -4.1 57.3 58.6 -6.2
 ILE-149   LEU-150  9.0 9.4 6.3 -8.8 56.7 54.8 4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees