Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-270   THR-271  8.0 7.1 -22.1 25.9 143.1 134.4 10.3
 THR-271   PHE-272  6.2 5.2 10.2 -12.1 99.9 107.1 15.2
 PHE-272   ALA-273  3.0 2.4 -5.3 7.6 100.9 101.3 -3.7
 ALA-273   GLU-274  6.2 5.6 1.5 -3.9 135.1 132.8 16.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-419   THR-420  13.7 13.5 0.6 15.2 106.8 106.3 -0.3
 THR-420   ASP-421  10.0 9.9 -0.2 13.6 141.7 135.0 47.1
 ASP-421   GLU-422  8.6 9.0 3.8 -11.1 96.9 81.7 3.1
 GLU-422   SER-423  4.9 5.5 -14.3 22.1 105.0 101.0 14.0
 SER-423   LYS-424  5.4 6.1 -46.9 43.0 51.8 38.2 -22.8
 LYS-424   TRP-425  7.4 7.5 5.4 -13.5 130.6 119.5 5.6
 TRP-425   ALA-426  7.1 6.6 6.1 -6.8 152.7 159.0 3.4
 ALA-426   PRO-427  6.9 6.2 -1.3 -4.7 40.6 44.4 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-430   ILE-431  4.4 3.6 -6.9 6.9 145.6 146.1 -0.4
 ILE-431   ASP-432  5.4 4.8 -8.7 7.0 144.3 141.9 -0.3
 ASP-432   PHE-433  4.4 3.6 -1.5 -3.2 88.8 86.9 6.0
 PHE-433   PRO-434  1.8 1.9 11.2 -15.8 19.1 18.5 -20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-472   ALA-473  8.3 8.1 2.2 -3.4 146.3 148.1 -7.7
 ALA-473   TYR-474  7.7 7.6 7.4 -16.0 142.1 136.3 37.3
 TYR-474   ASP-475  7.5 6.8 -7.7 13.3 34.7 29.8 -4.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-476   VAL-477  7.0 6.5 9.6 -15.9 50.1 50.7 -64.3
 VAL-477   ILE-478  4.1 3.5 1.2 2.4 30.9 37.1 48.7
 ILE-478   ASN-479  4.4 3.5 15.6 -7.3 59.0 58.9 14.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees