3-Dehydroquinate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-164   LYS-165  4.8 4.8 -6.2 -0.1 20.8 19.9 94.1
 LYS-165   THR-166  4.7 4.8 9.1 -3.4 112.8 115.9 -59.8
 THR-166   LEU-167  4.8 4.9 -13.9 10.1 118.9 114.0 -46.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-207   ASN-208  6.6 6.6 11.6 -10.4 95.8 95.4 -13.7
 ASN-208   GLY-209  10.3 10.3 13.4 -11.2 155.5 159.7 -39.0
 GLY-209   MET-210  11.8 11.8 -2.5 4.8 40.9 45.8 -21.3
 MET-210   ASP-211  8.5 8.3 -10.1 0.4 128.3 130.4 -107.8
 MET-210   ASP-211  8.5 8.3 -10.1 0.4 128.3 130.4 -107.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-210   ASP-211  8.5 8.3 -10.1 0.4 128.3 130.4 -107.8
 MET-210   ASP-211  8.5 8.3 -10.1 0.4 128.3 130.4 -107.8
 ASP-211   LYS-212  10.1 9.5 7.0 1.7 33.6 36.5 103.5
 LYS-212   TYR-213  12.5 12.1 -2.2 -1.3 131.2 135.5 -27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-220   LYS-221  8.9 8.5 20.2 -13.3 125.6 121.7 -76.3
 LYS-221   LEU-222  5.5 5.3 -19.3 21.4 57.3 54.8 -17.8
 LEU-222   ASP-223  8.0 7.8 -25.4 14.0 29.6 23.8 215.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-230   GLU-231  4.5 4.9 -2.7 -8.1 91.0 91.1 -37.7
 GLU-231   GLN-232  2.5 2.3 30.0 -13.9 25.4 29.5 225.1
 GLN-232   GLY-233  2.0 2.1 -3.2 7.2 98.1 92.8 -55.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees