Cdp-Glucose 4,6-Dehydratase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-198   ILE-199  8.2 8.5 -11.5 4.9 140.2 142.3 -122.9
 ILE-199   GLY-200  6.4 6.3 12.2 -17.8 84.3 83.5 -49.1
 GLY-200   GLY-201  3.0 2.9 1.7 -3.8 15.5 8.5 -19.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-208   LEU-209  13.9 13.5 -23.0 15.9 90.7 100.6 -15.6
 LEU-209   ILE-210  13.8 13.8 5.7 0.4 109.2 100.7 45.3
 ILE-210   PRO-211  10.5 10.4 -15.6 15.9 16.4 13.9 -109.9
 PRO-211   ASP-212  9.6 9.3 -7.4 3.0 57.2 57.3 83.6
 ASP-212   ILE-213  13.1 12.6 -19.6 24.5 89.4 91.7 33.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-237   LEU-238  5.0 4.7 -7.8 4.4 120.8 124.8 17.2
 LEU-238   GLU-239  4.8 4.8 -3.5 5.4 162.2 161.0 -11.8
 GLU-239   PRO-240  4.9 4.7 -1.7 2.1 102.8 100.9 13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-265   PRO-266  9.2 9.0 -8.9 1.1 68.2 63.9 48.6
 PRO-266   ARG-267  7.0 7.1 -2.5 -6.5 22.4 27.4 103.7
 ARG-267   ASP-268  7.2 7.6 -8.6 -9.8 97.7 100.5 61.1
 ASP-268   GLU-269  10.8 11.3 -3.4 16.9 114.8 98.0 130.9
 GLU-269   ASP-270  11.3 11.0 -15.4 0.5 176.1 157.2 -119.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-289   SER-290  18.8 18.4 -1.9 -18.2 114.0 114.5 -177.2
 SER-290   TRP-291  20.8 20.7 5.2 -19.8 86.8 91.0 40.7
 TRP-291   LEU-292  21.0 21.6 -2.8 12.4 82.9 98.3 90.1
 LEU-292   LEU-293  23.7 24.5 8.0 -8.4 69.1 65.8 -72.1
 LEU-293   ASP-294  25.6 26.2 -14.0 41.1 50.8 52.8 -199.7
 HIS-300   GLU-301  28.0 28.4 -36.1 56.9 105.4 168.2 40.6
 GLU-301   ALA-302  24.6 28.5 3.9 7.8 18.7 51.9 31.4
 HIS-303   TYR-304  23.5 22.8 -153.7 -42.8 127.6 30.1 376.8
 TYR-304   LEU-305  21.3 20.4 19.5 76.5 84.5 77.2 31.0
 LEU-305   LYS-306  18.6 19.1 8.8 -11.8 61.5 76.5 -33.0
 LYS-306   LEU-307  16.0 16.1 9.7 3.1 67.6 58.5 99.6
 LEU-307   ASP-308  14.5 14.9 13.6 -4.9 29.1 33.3 124.7
 ASP-308   CYS-309  13.7 13.8 1.6 5.9 92.5 93.7 -2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-320   ARG-321  2.3 2.3 7.1 -11.4 90.3 94.8 -31.6
 ARG-321   TRP-322  1.9 1.8 0.4 8.0 68.7 66.5 32.5
 TRP-322   GLY-323  2.8 3.0 -6.4 0.4 80.8 79.1 26.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-327   LEU-328  5.2 5.1 12.9 -5.6 146.8 150.8 -80.3
 LEU-328   SER-329  8.1 7.8 -14.7 4.8 60.4 52.7 97.6
 SER-329   ARG-330  9.2 9.1 -2.1 6.8 55.9 61.5 2.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-331   VAL-332  5.0 4.9 -11.5 3.2 141.6 142.3 -53.9
 VAL-332   LYS-333  8.2 8.1 3.6 -4.7 64.3 66.5 -70.0
 LYS-333   TRP-334  8.5 8.4 9.7 -9.0 52.2 54.7 33.6
 TRP-334   HIS-335  5.2 5.3 17.9 -8.2 25.6 26.7 88.5
 HIS-335   LYS-336  5.2 5.2 -4.4 8.1 132.1 133.4 62.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees