Succinyl-Coa Synthetase, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-325   PHE-326  5.6 5.3 -4.7 10.1 134.6 131.5 3.2
 PHE-326   GLY-327  7.5 7.3 6.3 9.1 104.9 111.0 -58.4
 GLY-327   GLY-328  10.7 10.5 162.5 -158.2 47.3 61.7 83.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-345   LEU-346  3.0 2.7 15.8 -20.5 89.6 93.9 66.4
 LEU-346   GLU-347  3.1 2.6 33.6 -25.4 84.9 85.3 84.1
 GLU-347   LEU-348  3.0 2.9 -1.2 -28.0 49.5 50.7 136.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-354   ARG-355  2.1 3.0 2.2 4.3 28.8 30.1 25.8
 ARG-355   LEU-356  2.4 3.2 -3.0 8.6 92.7 90.4 3.0
 LEU-356   GLU-357  5.3 5.6 -3.5 6.5 147.9 149.0 38.3
 GLU-357   GLY-358  7.3 7.6 -23.7 50.0 92.7 94.1 22.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-369   ASN-370  12.1 11.5 34.3 -44.6 22.0 33.6 -26.7
 ASN-370   SER-371  13.8 13.3 69.6 -54.2 41.9 45.9 128.1
 SER-371   GLY-372  10.5 10.3 1.3 19.7 62.5 43.4 76.6
 GLY-372   LEU-373  11.5 11.1 -32.1 18.1 95.3 83.5 -57.0
 LEU-373   PRO-374  8.2 7.8 12.3 -16.8 136.9 134.0 7.7
 PRO-374   ILE-375  9.0 8.7 18.9 -19.6 142.6 147.3 -7.4
 ILE-375   THR-376  6.6 7.0 48.1 -71.1 152.2 137.1 140.4
 THR-376   SER-377  8.0 8.5 4.4 20.1 129.7 135.5 -117.0
 SER-377   ALA-378  7.0 7.9 34.8 -43.5 159.3 151.2 105.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees