Maltose-Binding Protein Male3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Maltose-Binding Protein Male3
  Conformer 1
(PDB) 		6dtq (A)
  Conformer 2
(PDB) 		6dtr (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 205 0.56   133 - 294   365 - 407
2 182 1.02   21 - 132   295 - 364

Sequence


           _______________________________________________________________________________________________________________132______ 
 6dtq(A) : AVKITMTSGGVGKELEVLKKQLEMFHQQYPDIEVEIIPMPDSSTERHDLYVTYFAAGETDPDVLMLDVIWPAEFAPFLEDLTADKDYFELGEFLPGTVMSVTVNGRIVAVPWFTDAGLLY 
         :                                                                                                                          
 6dtr(A) : AVKITMTSGGVGKELEVLKKQLEMFHQQYPDIEVEIIPMPDSSTERHDLYVTYFAAGETDPDVLMLDVIWPAEFAPFLEDLTADKDYFELGEFLPGTVMSVTVNGRIVAVPWFTDAGLLY 
           _______________________________________________________________________________________________________________132______ 

           ________________________________________________________________________________________________________________________ 
 6dtq(A) : YRKDLLEKYGYDHAPRTWDELVEMAKKISQAEGIHGFVWQGARYEGLVCDFLEYLWSFGGDVLDESGKVVIDSPEAVAALQFMVDLIYKHKVTPEGVTTYMEEDARRIFQNGEAVFMRNW 
         :                                                                                                                          
 6dtr(A) : YRKDLLEKYGYDHAPRTWDELVEMAKKISQAEGIHGFVWQGARYEGLVCDFLEYLWSFGGDVLDESGKVVIDSPEAVAALQFMVDLIYKHKVTPEGVTTYMEEDARRIFQNGEAVFMRNW 
           ________________________________________________________________________________________________________________________ 

           ________________________________293__________________________________________________________________362________________ 
 6dtq(A) : PYAWSLVNSDESPIKGKVGVAPLPMGPGGRRAATLGGWVLGINKFSSPEEKEAAKKLIKFLTSYDQQLYKAINAGQNPTRKAVYKDPKLKEAAPFMVELLGVFINALPRPRVANYTEVSD 
         :                                                                                                                          
 6dtr(A) : PYAWSLVNSDESPIKGKVGVAPLPMGPGGRRAATLGGWVLGINKFSSPEEKEAAKKLIKFLTSYDQQLYKAINAGQNPTRKAVYKDPKLKEAAPFMVELLGVFINALPRPRVANYTEVSD 
           ________________________________293__________________________________________________________________362________________ 

           _________________________________                                                                                        
 6dtq(A) : VIQRYVHAALTRQTTSEDAIKNIAKELKFLL**                                                                                        
         :                                                                                                                          
 6dtr(A) : VIQRYVHAALTRQTTSEDAIKNIAKELKFLLGQ                                                                                        
           _________________________________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		35.8
Translation
(A) 		-0.1
Closure
(%) 		100.0
Bending Residues
( green ) 		  132 - 135
  293 - 295
  362 - 365
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download