Nonstructural Protein 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Nonstructural Protein 1
  Conformer 1
(PDB) 		4opa (B)
  Conformer 2
(PDB) 		4oph (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 114 0.93   83 - 196
2 79 2.62   4 - 82

Sequence


           ___________________________________________________________________________________81___________________________________ 
 4opa(B) : DSNTVSSFQVDCFLWHVRKRFADQELGDAPFLDRLRADQASLRGRGSTLGLDIETATRAGKQIVERILEEESDEALKM-----PASRYLTDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQ 
         :                                                                                                                          
 4oph(A) : DSNTVSSFQVDCFLWHVRKRFADQELGDAPFLDRLRADQASLRGRGSTLGLDIETATRAGKQIVERILEEESDEALKMTIASVPASRYLTDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQ 
           ___________________________________________________________________________________86___________________________________ 

           __________________________________________________________________________________                                       
 4opa(B) : AIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGLEWNDNTVRVSETLQRFAW                                       
         :                                                                                                                          
 4oph(A) : AIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGVLIGGLEWNDNTVRVSETLQRFAW                                       
           __________________________________________________________________________________                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		90.6
Translation
(A) 		-8.5
Closure
(%) 		86.2
Bending Residues
( green ) 		  81 - 83
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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