Protein Calg3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein Calg3
  Conformer 1
(PDB) 		3d0q (A)
  Conformer 2
(PDB) 		3oti (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 198 1.66   1 - 78   81 - 134   140 - 170   185 - 187   192 - 212   312 - 315   363 - 372
2 167 1.17   79 - 80   135 - 139   171 - 184   188 - 191   213 - 311   316 - 362

Sequence


           ________________________________________________________________________________78______________________________________ 
 3d0q(A) : **HrVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGT-aLVDDYRPDLVVYEQ 
         :                                                                                                                          
 3oti(A) : RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQ 
           ________________________________________________________________________________78______________________________________ 

           _______________134__139____________________________170______179_________191____________206______________________________ 
 3d0q(A) : GATVGLLAADRAGVPAVQRNQSAWRTRG-hRSIASFLTDL-dKHQVSLPEPVATIESFPPSLLLEAEPEGWF-rWVPYGGGAVLGDRLPPVPARPEVAIT-gTIELQAFGIGAVEPIIAA 
         :                                                                                                                          
 3oti(A) : GATVGLLAADRAGVPAVQRNQSAWRTRGMHRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPEGWFMRWVPYGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAA 
           _______________134__139____________________________170______179_________191____________206______________________________ 

           ________________________________________________________________________311_315_________________________________________ 
 3d0q(A) : AGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTAVVHHGGGGTV-tAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVREE 
         :                                                                                                                          
 3oti(A) : AGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAAREVREE 
           ________________________________________________________________________311_315_________________________________________ 

           ___362_____________                                                                                                      
 3d0q(A) : -vALPTPAETVRRIVERI*                                                                                                      
         :                                                                                                                          
 3oti(A) : MVALPTPAETVRRIVERIS                                                                                                      
           ___362_____________                                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.2
Translation
(A) 		1.0
Closure
(%) 		84.8
Bending Residues
( green ) 		  78 - 81
  134 - 135
  139 - 140
  170 - 171
  179 - 188
  191 - 192
  206 - 213
  311 - 312
  315 - 316
  362 - 363
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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