Putative Iron Compound-Binding Protein Of Abc Transporter Family

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Iron Compound-Binding Protein Of Abc Transporter Family
  Conformer 1
(PDB) 		3be5 (A)
  Conformer 2
(PDB) 		3be6 (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 148 1.06   21 - 159   245 - 250   290 - 292
2 137 0.46   160 - 244   251 - 289   293 - 310

Sequence


           ________________________________________________________________________________________________________________________ 
 3be5(A) : EPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK 
         :                                                                                                                          
 3be6(C) : EPVQVFTDDLGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSHFIRSGALLTGVDFDNSSIAFIGTADIDIEAIVAAKPDLIITEPTRNTPIERLEKIAPTVSIDHLK 
           ________________________________________________________________________________________________________________________ 

           __________________159________________________________________________________________________________244________________ 
 3be5(A) : GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVhSYHSLGRVLRDAGFRFPPLIESIPEGGRdVSAERLPELDADFVFATWRGDTGGKPQDELATe 
         :                                                                                                                          
 3be6(C) : GGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATLDSQKITVSVIQANQGKINVhSYHSLGRVLRDAGFRFPPLIESIPEGGRdVSAERLPELDADFVFATWRGDTGGKPQDELATe 
           __________________159________________________________________________________________________________244________________ 

           _______________________288_______________________                                                                        
 3be5(A) : KVpGWCQFLTACRSGRYVLISREEAISNSFASLGLaAQIQSQIAGRPLP                                                                        
         :                                                                                                                          
 3be6(C) : KVpGWCQFLTACRSGRYVLISREEAISNSFASLGLaAQIQSQIAGRPLP                                                                        
           _______________________288_______________________                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.0
Translation
(A) 		0.7
Closure
(%) 		99.1
Bending Residues
( green ) 		  159 - 162
  244 - 252
  288 - 294
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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