Putative Fimbrial Subunit

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Putative Fimbrial Subunit
  Conformer 1
(PDB) 		4hss (A)
  Conformer 2
(PDB) 		4hss (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 263 0.72   183 - 451
2 125 0.32   44 - 182

Sequence


           ________________________________________________________________________________________________________________________ 
 4hss(A) : QRANIDFERKGSLTLHKKKGAESEKRATGKEMDDVAGEPLNGVTFKITKLNFDLQNGDWAKFPKTAADAKGHETSTTKEVETSGNGTAVFDNLDLGIYLVEETKAPDGIVTGAPFIVSIP 
         :                                                                                                                          
 4hss(B) : QRANIDFERKGSLTLHKKKGA--------------aGEPLNGVTFKITKLNFDLQNGDWAKFPKTAADAKGHETSTTKEVETSGNGTAVFDNLDLGIYLVEETKAPDGIVTGAPFIVSIP 
           ________________________________________________________________________________________________________________________ 

           ________________180_____________________________________________________________________________________________________ 
 4hss(A) : MVNEASDAWNYNVVAYPKNTETKTEKTVKDADQNIQDAYTYTIKADAPTWGKDKKLTAFRFEDELDKRLDFQKVTEVKAGDTVLGTSDYTVNDPATDGNKLVVTLTDEGLKKVKSGDKMS 
         :                                                                                                                          
 4hss(B) : MVNEASDAWNYNVVAYPKNTETKTEKTVKDADQNIQDAYTYTIKADAPTW---kKLTAFRFEDELDKRLDFQKVTEVKAGDTVLGTSDYTVNDPATDGNKLVVTLTDEGLKKVKSGDKMS 
           ________________180_____________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 4hss(A) : LTFEVKRKEVGNTTELKNRADVIFNNPNTDKEVKNKTNEVVTYHGKLKVVKKDGKEAGKVLKGAEFELYQCTSAAVLGKGPLTVDGVKKWTTGDDGTFTIDGLHVTDFEDGKEAAPATKK 
         :                                                                                                                          
 4hss(B) : LTFEVKRKEVGNTTELKNRADVIFNNPNTDKEVKNKTNEVVTYHGKLKVVKKDGKEAGKVLKGAEFELYQCTSAAVLGKGPLTVDGVKKWTTGDDGTFTIDGLHVTDFEDGKEAAPATKK 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________                                                                     
 4hss(A) : FCLKETKAPAGYALPDPNVTEIEFTRAKISEKDKFd-EVTLVSEIKNIKQGT                                                                     
         :                                                                                                                          
 4hss(B) : FCLKETKAPAGYALPDPNVTEIEFTRAKISEKDeGDDEVTLVSEIKNIKQ**                                                                     
           ____________________________________________________                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		33.1
Translation
(A) 		0.3
Closure
(%) 		19.6
Bending Residues
( green ) 		  180 - 184
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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