Udp-N-Acetylglucosamine 2-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-N-Acetylglucosamine 2-Epimerase
  Conformer 1
(PDB) 		3beo (A)
  Conformer 2
(PDB) 		1o6c (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 188 1.28   5 - 180   352 - 369
2 146 2.1   181 - 351

Sequence


           ________________________________________________________________________________________________________________________ 
 3beo(A) : GPVDMTERLKVMTIFGTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQI 
         :                                                                                                                          
 1o6c(A) : ******KKLKV-tVFGTRPEAIK-aPLVLELKKYPE-IDSYVTVTAQHRQ-lDQVLDAFHIKPDFDLNI-kERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQI 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________180________________________________________________________ 
 3beo(A) : PVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQ 
         :                                                                                                                          
 1o6c(A) : AVGHVEAGLRTGNKYSPFPEELNRQ-tGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDK-iLLT----eN--------fKAIRRIVGEFEDVQ 
           _____________________________________________________________178________________________________________________________ 

           ______________________________________________________________________________________________________________349_______ 
 3beo(A) : VVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDSGGVQEEAPSLGVPVLVLRDTTERPEGIEAGTLKLAGTDEETIFSLADELLSDKEAHDKMSKASNPYGDGR 
         :                                                                                                                          
 1o6c(A) : VVYP----pVVREAAHK--HdSDRVHLIEPLEVIDFHNFAAKSHFILTD--gVQEEAPSLGKPVLVLRDTTE---gVEAGTLKLAGTDEENIYQLAKQLLTDPDEYKK-sQASNPYGDGE 
           ______________________________________________________________________________________________________________347_______ 

           ________________________                                                                                                 
 3beo(A) : ASERIVEAILKHFNK*********                                                                                                 
         :                                                                                                                          
 1o6c(A) : ASRRIVEELLFHYGYRKEQPDSFT                                                                                                 
           ________________________                                                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		29.6
Translation
(A) 		0.3
Closure
(%) 		91.7
Bending Residues
( green ) 		  180 - 181
  349 - 352
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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