Zinc-Alpha-2-Glycoprotein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Zinc-Alpha-2-Glycoprotein
  Conformer 1
(PDB) 		1t7z (A)
  Conformer 2
(PDB) 		1zag (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 176 0.64   7 - 182
2 93 0.59   183 - 275

Sequence


           ________________________________________________________________________________________________________________________ 
 1t7z(A) : DGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYKDSTGSHVLQGRFGCEIENNRSSGAFWKYYYDGKDY 
         :                                                                                                                          
 1zag(A) : DGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKDRKSQPMGLWRQVEGMEDWKQDSQLQKAREDIFMETLKDIVEYYNDSNGSHVLQGRFGCEIENNRSSGAFWKYYYDGKDY 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________175_____________________________________________________________________ 
 1t7z(A) : IEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGTYQS 
         :                                                                                                                          
 1zag(A) : IEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNILDRQDPPSVVVTSHQAPGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLHNGNGTYQS 
           ________________________________________________175_____________________________________________________________________ 

           _________________________________                                                                                        
 1t7z(A) : WVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA                                                                                        
         :                                                                                                                          
 1zag(A) : WVVVAVPPQDTAPYSCHVQHSSLAQPLVVPWEA                                                                                        
           _________________________________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		15.2
Translation
(A) 		-0.7
Closure
(%) 		84.9
Bending Residues
( green ) 		  175 - 183
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download